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The University of Southampton
µ-VIS: Multidisciplinary, Multiscale, Microtomographic Volume Imaging

Correlative Imaging Forum

Correlative imaging forum
μCT+H&E of a lung sample; Image courtesy of O.Katsamenis & M. Lawson

Correlative Imaging Forum is an open discussion platform that brings together research staff from the Biomedical Imaging Unit (BIU) and the μ-VIS X-Ray Imaging Centre working on correlative imaging.

The meetings are organised by Dr. Orestis Katsamenis (coordinator), Dr Philipp Schneider and Dr. Peter Lackie and take place biweekly. Meeting sites alternate between BIU (University Hospital Southampton) and μ-VIS (Highfield Campus) to allow researchers for other groups based on either campuses to participate.

Discussions are focused on technical issues and application areas related to correlative imaging, including latest developments in imaging and image processing as well as potential funding opportunities and conference calls. The forum provides an opportunity for students and academics to discuss, troubleshoot and receive feedback on their ongoing projects, and to enlarge their professional network at the University.

 The information provided below is subject to last-minute change. For upcoming meetings always refer to the mailing list.

Date Venue Presenter Topic
09 July 2020 BIU Elaine Ho tbc
25 June 2020 μ-VIS tbc tbc
11 June 2020 BIU tbc tbc
28 May 2020 μ-VIS Phil Basford Introducing the new Dectris detector
14 May 2020 BIU tbc tbc
30 April 2020 μ-VIS tbc tbc
16 April 2020 BIU tbc tbc
02 April 2020 μ-VIS David S Chatelet tbc
19 March 2020 BIU Elaine Ho tbc
05 March 2020 μ-VIS Jenny Pearson-Farr tbc
20 February 2020 BIU tbc tbc
06 February 2020 μ-VIS tbc tbc
23 January 2020 BIU tbc tbc
09 January 2020 μ-VIS tbc tbc
26 December 2019 BIU tbc tbc
12 December 2019 μ-VIS Phil Basford GitHub and version control
28 November 2019 BIU David S Chatelet tbc
14 November 2019 μ-VIS Jenny Pearson-Farr tbc
31 October 2019 BIU Vito Mennella A short introduction on Vito's research portfolio
17 October 2019 μ-VIS Elena Konstantinopoulou syGlass software trial - VR visualisation of CT data
03 October 2019 #REF! Orestis Katsamenis Everyone - round table discussion about users' experience using Dragonfly on IRIDIS visualisation cluster
19 September 2019 μ-VIS Elaine Ho summary of Dragonfly Workshop that took place on the 1st day of ToScA conference at So'ton
11 July 2019 BIU Phil Basford GitHub and version control
27 June 2019 μ-VIS Artur Kirjakulov Augmented reality for interactive poster presentations: examples on EM and CARS imaging
13 June 2019 BIU Marco Curto Multi-material 3D Printing of Bioinspired Mechanical Architectures
30 May 2019 μ-VIS Orestis Katsamenis Internal software development: scripting and workflows repo
16 May 2019 μ-VIS Elena Konstantinopoulou Host-Pathogen interaction in tuberculosis by bioelectrospray 3D cell culture modelling and label-free Imaging
02 May 2019 μ-VIS Patrica Goggin Stained bone imaging and Image processing for segmantation and analysis - proress update
Easter break      
04 April 2019 μ-VIS Matt Lawson Progress update on methodology for automatic registration of Histology on μCT
21 March 2019 BIU Jenny Pearson-Farr Analysis of ciliated cells of the human endometrium
07 March 2019 μ-VIS Elaine Ho Introduction of PhD project - 3D X-ray Histology for Soft Tissue Imaging
21 February 2019 BIU David Chatelet 3D data visualisation and analysis Draginfly v4.0 - Software assesment
07 February 2019 μ-VIS Hannah Paul Analysis of 3D tructure of D11B-positive Dendritic cells (DCs)
24 January 2019 BIU Steph Robinson Automatic segmentation of DAB stained lymphatics - discussion on tissue preparation that keeps the native lung structure
10 January 2019 μ-VIS Orestis Katsamenis Feedback, planning & open floor
Christmas break      
13 December 2018 μ-VIS Harry Rossides The role of X-ray refraction in image formation: An overview of absorption and phase contrast CT imaging techniques
29 November 2018 BIU Suzanne Brooks Correlative imaging work flows involving lightsheet microscopy
15 November 2018 μ-VIS Matt Lawson, David Chatelet Using IRIDIs supercomputer - Experience so far…
01 November 2018 BIU Orestis Katsamenis Helical scanning - preliminary data & Open floor
18 October 2018 μ-VIS Thomas Clark Correlative neutron & CT imaging of plant roots
04 October 2018 BIU Patrica Goggin Stained bone imaging and Image processing for segmantation and analysis
06 September 2018 BIU Beth Broadbent Fast intraoperative μCT imaging of biopsy samples - MSc project
Summer break      
12 July 2018 BIU Matt Lawson Elastic registration of histological images to μCT volume data
28 June 2018 μ-VIS Harry Rossides Cyclorama algorithm
14 June 2018 BIU Orestis Katsamenis Kick-off session
       

 

 

 

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