Biomedical image processing and analysis facility

About the Biomedical image processing and analysis facility

We have a wide variety of high end graphics workstations, touchscreen monitors and dedicated software for scientific image processing and analysis.

Please contact David Chatelet (d.s.chatelet@soton.ac.uk) to discuss your analysis needs.

Technical specification

Amira workstation 1

  • touchscreen Wacom Cintiq 22HD monitor (1920x1080) for manual tracing/segmentation
  • 32 core Xeon
  • 128GB RAM
  • Asus Radeon RX580 8GB graphics card
  • FEI Amira 3D software for 3D segmentation and analysis
  • digital micrograph (GMS3.2) for visualisation, manipulation and analysis of 3View datasets
     

Amira workstation 2

  • touchscreen Wacom Cintiq monitor (1920x1080) for manual tracing/segmentation
  • 24 core Xeon processor
  • 192GB RAM
  • NVIDIA Quadro K4200 4GB graphics
  • FEI Amira 3D software for 3D segmentation and analysis
     

Imaris workstation

  • 8 core i7
  • 16GB RAM
  • NVIDIA Quadro 2000 1GB graphics
  • machine locked licence for Imaris (triple channel co-localisation capability)
     

General imaging workstation

  • 4 core i7
  • 16GB RAM
  • NVIDIA GeForce GTX550ti 1GB graphics
     

Touchscreen monitor for short term loan (x6)

  • 6 Wacom Cintiq 13HD touchscreen monitors (1920x1080) for manual segmentation/tracing on your own device
     

Volocity

  • single user network licence for visualisation and co-localisation
  • local install
  • single user at any one time
     

Olympus VS desktop

  • 10 user network licence with custom ROI extraction module for working with virtual slide data from our dotSlide and VS110 slide scanners
  • 4 remote access workstations for Mac users
     

Ultimaker 3 extended 3D printer

  • dual filament extrusion system (2 colour/2 material/print material and removeable or water soluble support material)
  • supports PLA, ABS, nylon, polypropylene and many other extrudable plastics
  • fast normal and fine print modes
  • highly customisable print settings through Ultimaker Cura software

Contact us

Contact us

We are based in the Laboratory and Pathology block at Southampton General Hospital.
We’re open Monday to Friday 09:00 to 17:00 UK time.