Publications

Browse our publications to learn more about our research.
First report of Epicoccum sorghinum causing leaf blight on Pseudostellaria heterophylla in China
Siyu Zhang, Xuemi Liu, Jiangping Yu, Shiyunhua Qian, Kaixin Gu, Weiwei Mu, Shuangshuang Hou, Tomislav Cernava & Xiaoyulong Chen, 2025, Plant Disease, 109(12)
DOI: 10.1094/PDIS-05-25-0938-PDN
Type: article
KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family
Daniela Rothschild-Rodriguez, Kai S. Lambon, Simran Krishnakant Kushwaha, Sofya K. Garushyants, Moritz Ertelt, Agnieszka Latka, Ana Rita Costa, Anna Mantzouratou, Claire King, Dimitri Boeckaerts, Elizabeth Sheridan, Eugene V. Koonin, Francesca Merrick, Francis Drobniewski, Ilaria De Angelis, Kordo Saeed, Macy Martin, J. Mark Sutton, Matthew E. Wand, Michael Andrew, Morgen Hedges, Stan J.J. Brouns, Pieter Jan Haas, Sophie T. Lawson, Stephen M.E. Fordham, Yan Jiun Lee, Yieri Wu, Yves Brs, Peter Braun, Peter R. Weigele & Franklin L. Nobrega, 2025, Nucleic Acids Research, 53(21)
DOI: 10.1093/nar/gkaf1122
Type: article
Taxonomic and mechanistic insights into gut microbiota bioaccumulation of entacapone using bioorthogonal drug labelling
Linda M. Guantai, Clementine E. Bavinton, Juwairiyah B. Shazzad, Sumeet Mahajan, Sam Thompson & Fatima C. Pereira, 2025, Microbiome Research Reports, 4(4)
DOI: 10.20517/mrr.2025.73
Type: article
Low soil phosphorus and high symbiotic fungal richness inhibits plant aboveground biomass in fragmented forests in China
Jing Guo, Liying Chu, Xuying Ye, William L. King, Jianbing Shao, Zhonghan Wang, Jinliang Liu, Chuwen Chen & Mingjian Yu, 2025, Communications Biology, 8(1)
DOI: 10.1038/s42003-025-08978-w
Type: article
Harnessing machine learning to predict antibiotic susceptibility in Pseudomonas aeruginosa biofilms
Fauve Vergauwe, Gaetan De Waele, Andrea Sass, Callum Highmore, Niall Hanrahan, Yoshiki Marius David Cook, Mads Lichtenberg, Margo Cnockaert, Peter Vandamme, Sumeet Mahajan, Jeremy Webb, Filip Van Nieuwerburgh, Thomas Bjarnsholt, Willem Waegeman & Tom Coenye, 2025, NPJ Biofilms and Microbiomes, 11(1)
DOI: 10.1038/s41522-025-00833-4
Type: article
Microbial colonizers in an agroecosystem under diverse cover crop treatments
Sarah C. Richards, William L. King, Lily Y. Cao, Brosi A. Bradley, Emma K. Rice, Carolyn J. Lowry, Raúl Román, Jason P. Kaye, Estelle M. Couradeau & Terrence H. Bell, 2025, Phytobiomes Journal
DOI: 10.1094/pbiomes-07-25-0054-r
Type: article
Agent-based modelling and time series inference of filamentous yeast colonies
2025
DOI: 10.1101/2025.09.15.676253
Type: other