About
Dr Jane Gibson is a Lecturer in Cancer Bioinformatics and Genomics within Medicine at the University of Southampton.
Research
Research groups
Member of:
Current research
Dr Gibson has experience in bioinformatics, and expertise the computational analysis of high throughput next generation sequencing data. Including exome, whole genome, epigenome, and transcriptome analyses, as well as Genome-Wide Association studies.
Her research involves bioinformatics approaches to understanding cancer, the human genome and the changes which can lead to disease. Leveraging the molecular data generated from a range of technologies to understand the development, progression, and response to treatment in cancer.
Publications
68 publications
Page 1 of 7
Carolina Jaramillo Oquendo,
David Oscier,
Jane Gibson,
, 2021
, Journal of Translational Genetics and Genomics
Type: review
,
Fereshteh Izadi,
Maria Secrier,
Robert C. Walker,
Saqib Rahman,
Ginny Devonshire,
Megan A. Lloyd,
Rebecca C. Fitzgerald,
& Tim J. Underwood
, 2021
, Cancers
, 13 (14)
Type: article
,
Axel Petzold,
Sharon Y.L. Chua,
Anthony P. Khawaja,
Pearse A. Keane,
Peng T. Khaw,
Charles Reisman,
Baljean Dhillon,
Nicholas G. Strouthidis,
Paul J. Foster,
Praveen Patel,
Denize Atan,
Tariq Aslam,
Sarah A. Barman,
Jenny H. Barrett,
Paul Bishop,
Catey Bunce,
Roxana O. Carare,
Usha Chakravarthy,
Michelle Chan,
Sharon Y.L. Chua,
David P. Crabb,
Alexander Day,
Parul Desai,
Bal Dhillon,
Andrew D. Dick,
Cathy Egan,
Paul J. Foster,
Marcus Fruttiger,
John E.J. Gallacher,
David F. Garway-Heath,
Jane Gibson,
Dan Gore,
Jeremy A. Guggenheim,
Chris J. Hammond,
Alison Hardcastle,
Simon P. Harding,
Ruth E. Hogg,
Pirro Hysi,
Pearse A. Keane,
Sir Peng T. Khaw,
Anthony P. Khawaja,
Gerassimos Lascaratos,
Tom MacGillivray,
Sarah MacKie,
Michelle McGaughey,
James E. Morgan,
, 2021
, Brain
, 144 (1) , 224--235
Type: article
Investigation of associations between retinal microvascular parameters and albuminuria in UK Biobank
,
Euan N. Paterson,
Chris Cardwell,
Thomas J. MacGillivray,
Emanuele Trucco,
Alexander S. Doney,
Paul Foster,
Alexander P. Maxwell,
Gareth McKay,
Tariq Aslam,
Sarah Barman,
Jenny Barrett,
Paul Bishop,
Peter Blows,
Catey Bunce,
Roxana Carare,
Usha Chakravarthy,
Michelle Chan,
Antonietta Chianca,
Valentina Cipriani,
David Crabb,
Philippa Cumberland,
Alexander Day,
Parul Desai,
Bal Dhillon,
Andrew Dick,
Cathy Egan,
Marcus Fruttiger,
John Gallacher,
David (Ted) Garway-Heath,
Jane Gibson,
Dan Gore,
Jeremy Guggenheim,
Chris Hammond,
Alison Hardcastle,
Simon Harding,
Ruth Hogg,
Pirro Hysi,
Pearse A. Keane,
Sir Peng Tee Khaw,
Anthony Khawaja,
Gerassimos Lascaratos,
Phil Luthert,
Tom MacGillivray,
Sarah Mackie,
Keith Martin,
James Morgan,
, 2021
, BMC Nephrology
, 22 (1) , 72
Type: article
,
,
,
,
,
,
,
Puya Gharahkhani,
Eric Jorgenson,
Pirro Hysi,
Anthony P. Khawaja,
Sarah Pendergrass,
Xikun Han,
Jue Sheng Ong,
Alex W. Hewitt,
Ayellet V. Segrè,
John M. Rouhana,
Andrew R. Hamel,
Robert P. Igo,
Helene Choquet,
Ayub Qassim,
Navya S. Josyula,
Jessica N. Cooke Bailey,
Pieter W.M. Bonnemaijer,
Adriana Iglesias,
Owen M. Siggs,
Terri L. Young,
Veronique Vitart,
Alberta A.H.J. Thiadens,
Juha Karjalainen,
Steffen Uebe,
Ronald B. Melles,
K. Saidas Nair,
Robert Luben,
Mark Simcoe,
Nishani Amersinghe,
Rene Hohn,
Alicia Poplawski,
Li Jia Chen,
Shi Song Rong,
Tin Aung,
Sarah Martin,
Andrew J. White,
Roxana Carare,
Paul Foster,
Jane Gibson,
James E. Morgan,
Xin Wang,
Nicholas G. Martin,
James E. Morgan,
& Ching Yu Cheng
, 2021
, Nature Communications
, 12 (1)
Type: article
,
,
,
Qiao Fan,
Alfred Pozarickij,
Nicholas Y.Q. Tan,
Xiaobo Guo,
Virginie J.M. Verhoeven,
Veronique Vitart,
Jeremy A. Guggenheim,
Masahiro Miyake,
J. Willem L. Tideman,
Anthony P. Khawaja,
Liang Zhang,
Stuart MacGregor,
René Höhn,
Peng Chen,
Ginevra Biino,
Juho Wedenoja,
Seyed Ehsan Saffari,
Milly S. Tedja,
Jing Xie,
Carla Lanca,
Ya Xing Wang,
Srujana Sahebjada,
Johanna Mazur,
Alireza Mirshahi,
Nicholas G. Martin,
Seyhan Yazar,
Craig E. Pennell,
Maurice Yap,
Annechien E.G. Haarman,
Clair A. Enthoven,
Jan Roelof Polling,
Joan E. Bailey-Wilson,
Amutha Barathi Veluchamy,
Kathryn P. Burdon,
Harry Campbell,
Li Jia Chen,
Emily Y. Chew,
Jamie E. Craig,
Phillippa M. Cumberland,
David M. Evans,
Qing Li,
James F. Wilson,
Roxana O. Carare,
Jane Gibson,
James E. Morgan,
Paul J. Foster,
& Ching Yu Cheng
, 2020
, Communications Biology
, 3 (1) , 1--14
Type: article
Luke O'Gorman,
Chelsea Norman,
Luke Michaels,
Tutte Newall,
Andrew H. Crosby,
Christopher Mattocks,
Emma L. Baple,
Arjuna Ratnayaka,
Daniel Osborne,
Fatima Shawkat,
, 2019
, Scientific Reports
, 9 (1)
Type: article
Bing Zhang,
Yusrah Shweikh,
Anthony P. Khawaja,
John Gallacher,
Sarah Bauermeister,
Paul J. Foster,
,
Tariq Aslam,
Sarah A. Barman,
Jenny H. Barrett,
Paul Bishop,
Peter Blows,
Catey Bunce,
Roxana O. Carare,
Usha Chakravarthy,
Michelle Chan,
Sharon Y.L. Chua,
David P. Crabb,
Philippa M. Cumberland,
Alexander Day,
Parul Desai,
Bal Dhillon,
Andrew D. Dick,
Cathy Egan,
Paul Foster,
Marcus Fruttiger,
John E.J. Gallacher,
David F. Garway-Heath,
Jane Gibson,
Dan Gore,
Jeremy A. Guggenheim,
Chris J. Hammond,
Alison Hardcastle,
Simon P. Harding,
Ruth E. Hogg,
Pirro Hysi,
Pearse A. Keane,
Sir Peng T. Khaw,
Gerassim dos Lascaratos,
Tom Macgillivray,
Sarah Mackie,
Keith Martin,
Michelle McGaughey,
Bernadette McGuinness,
Gareth J. McKay,
Martin McKibbin,
Danny Mitry,
James E. Morgan,
& Jay Self
, 2019
, Ophthalmology
, 126 (11) , 1500--1510
Type: article
,
Alfred Pozarickij,
Cathy Williams,
Pirro G. Hysi,
Jeremy A. Guggenheim,
Tariq Aslam,
Sarah A. Barman,
Jenny H. Barrett,
Paul Bishop,
Peter Blows,
Catey Bunce,
Roxana O. Carare,
Usha Chakravarthy,
Michelle Chan,
Sharon Y.L. Chua,
David P. Crabb,
Philippa M. Cumberland,
Alexander Day,
Parul Desai,
Bal Dhillon,
Andrew D. Dick,
Cathy Egan,
Paul Foster,
Marcus Fruttiger,
John E.J. Gallacher,
David F. Garway-Heath,
Jane Gibson,
Dan Gore,
Chris J. Hammond,
Alison Hardcastle,
Simon P. Harding,
Ruth E. Hogg,
Pearse A. Keane,
Sir Peng T. Khaw,
Anthony P. Khawaja,
Gerassimos Lascaratos,
Tom Mac Gillivray,
Sarah Mackie,
Keith Martin,
Michelle McGaughey,
Bernadette McGuinness,
Gareth J. McKay,
Martin McKibbin,
Danny Mitry,
Tony Moore,
James E. Morgan,
Zaynah A. Muthy,
Eoin O’Sullivan,
& Jay Self
, 2019
, Communications Biology
, 2 (1)
Type: article
Carolina Jaramillo Oquendo,
David G. Oscier,
Jane Gibson,
, 2019
, Scientific Reports
, 9 (1) , 1--9
Type: article
Supervision
Current PhD Students
Jack Harrington
PhD Cancer Sciences
Cell Biol & Immunology of Cncr
PhD Cancer Sciences
Louise Jane Carr
Cell Biol & Immunology of Cncr
Cell Biol & Immunology of Cncr
Oliver John Pickering
DM Cancer Sciences PT
Teaching
Dr Gibson in Doctoral Progamme Lead for Cancer Sciences. She is co-module lead for the MEDI6235 Genomic Informatics module and lecturer on the MEDI6237 Genomic Technologies and Basic Informatics module of the MSc in Genomic Medicine. She also supervises and marks MSc and iPhD research projects.
She contributes to the undergraduate BM5 programme, taking on the role of Personal Tutor and supervising 3rd year research projects and associated project marking.
Dr Gibson also contributes to teaching in BSc Biomedical Science, Biochemistry and Pharmacology programmes, delivering lectures and workshops on Bioinformatics (BIOL3063/6074/6055).